Skip to contents

Report_KRI function

Source: R/Report_KRI.R
Report_KRI.Rd

[Stable]

This function generates a KRI report based on the provided inputs.

Usage

Report_KRI(
  lCharts = NULL,
  dfResults = NULL,
  dfGroups = NULL,
  dfMetrics = NULL,
  strOutputDir = getwd(),
  strOutputFile = NULL
)

Arguments

lCharts

A list of charts to include in the report.

dfResults

data.frame A stacked summary of analysis pipeline output. Created by passing a list of results returned by Summarize() to BindResults(). Expected columns: GroupID, GroupLevel, Numerator, Denominator, Metric, Score, Flag, MetricID, StudyID, SnapshotDate.

dfGroups

data.frame Group-level metadata dictionary. Created by passing CTMS site and study data to MakeLongMeta(). Expected columns: GroupID, GroupLevel, Param, Value.

dfMetrics

data.frame Metric-specific metadata for use in charts and reporting. Created by passing an lWorkflow object to MakeMetric(). Expected columns: File, MetricID, Group, Abbreviation, Metric, Numerator, Denominator, Model, Score, and Threshold. For more details see the Data Model vignette: vignette("DataModel", package = "gsm").

strOutputDir

The output directory path for the generated report. If not provided, the report will be saved in the current working directory.

strOutputFile

The output file name for the generated report. If not provided, the report will be named based on the study ID, Group Level and Date.

Value

File path of the saved report html is returned invisibly. Save to object to view absolute output path.

Examples

if (FALSE) { # \dontrun{
# Run reports
lCharts <- MakeCharts(
  dfResults = reportingResults,
  dfGroups = reportingGroups,
  dfMetrics = reportingMetrics,
  dfBounds = reportingBounds
)

strOutputFile <- "StandardSiteReport.html"
kri_report_path <- Report_KRI(
  lCharts = lCharts,
  dfResults = reportingResults,
  dfGroups = reportingGroups,
  dfMetrics = reportingMetrics,
  strOutputFile = strOutputFile
)
} # }