Package index

graph_create()
 Create the initial graph for a multiple comparison procedure

print(<initial_graph>)
 S3 print method for the class
initial_graph

plot(<initial_graph>)
 S3 plot method for class
initial_graph

as_initial_graph()
as_graphMCP()
as_igraph()
 Convert between graphicalMCP, gMCP, and igraph graph classes

graph_update()
 Obtain an updated graph by updating an initial graphical after deleting hypotheses

print(<updated_graph>)
 S3 print method for the class
updated_graph

plot(<updated_graph>)
 S3 plot method for the class
updated_graph

graph_generate_weights()
 Generate the weighting strategy based on a graphical multiple comparison procedure

graph_test_closure()
 Perform closed graphical multiple comparison procedures

graph_test_shortcut()
 Perform shortcut (sequentially rejective) graphical multiple comparison procedures

print(<graph_report>)
 S3 print method for the class
graph_report

graph_rejection_orderings()
 Find alternate rejection orderings (sequences) for shortcut tests

adjust_p_bonferroni()
adjust_p_parametric()
adjust_p_simes()
 Calculate adjusted pvalues

adjust_weights_parametric()
adjust_weights_simes()
 Calculate adjusted hypothesis weights

graph_calculate_power()
 Calculate power values for a graphical multiple comparison procedure

print(<power_report>)
 S3 print method for the class
power_report

bonferroni()
bonferroni_holm()
huque_etal()
fallback()
fallback_improved_1()
fallback_improved_2()
fixed_sequence()
simple_successive_1()
simple_successive_2()
random_graph()
two_doses_two_primary_two_secondary()
three_doses_two_primary_two_secondary()
 Example graphs of commonly used multiple comparison procedures